主要的學術業績如下：
（1）通過對雲南下泥盆統徐家沖組的綜合研究，發現最古老的具根系古土壤，提供了原始植物在土壤中克隆生長的直接證據；提出克隆生長是早期維管植物作用于地球系統的一種重要機制；揭示出早期植物對陸地環境的顯著作用體現在促進土壤形成、增強地貌穩定性以及促進曲流河構型的形成等多個方面（Xue et al. 2016, PNAS封面文章）。http://pkunews.pku.edu.cn/xxfz/2016-08/24/content_294687.htm
（2）對華南晚古生代313種葉片化石的形态學特征進行編碼，建立了目前較為完善的多維形态數據集，定量揭示了葉片形态變異度與屬種豐富度之間的動态關系，提出古生代葉片形态的宏演化模式（Xue et al. 2015, Earth-Science Reviews）。
http://www.nsfc.gov.cn/publish/portal0/tab38/info48558.htm
（3）報道了華南和其他地區的大量第一手化石材料，系統研究了志留—泥盆紀維管植物50 餘屬，豐富了研究基礎薄弱的、最早期維管植物的大化石記錄，揭示了諸多真葉植物、石松綱早期化石代表的形态學和解剖學特征。這些成果體現于50餘篇論著中。
http://www.cast.org.cn/n35081/n35473/n35518/13232833.html
（4）基于最簡約法和貝葉斯法，厘定了志留—泥盆紀石松植物的系統發育關系；提出早期維管植物的一個新的系統發育框架，重新界定了過去長期存在争議的萊尼蕨綱和工蕨綱；提出維管植物支系在早泥盆世“大爆發”的假說（Hao and Xue 2013, 專著）。
專著、編著章節和詞條Monographs and book chapters
1 Hao Shougang, Xue Jinzhuang. 2013a. The Early Devonian Posongchong Flora of Yunnan - A Contribution to an Understanding of the Evolution and Early Diversification of Vascular Plants. Beijing: Science Press. 1-366.
2 劉建波, 楊守仁, 薛進莊, 馬學平, 孫作玉. 2013. 古生物與沉積環境. 見：馮增昭等（主編），中國沉積學（第二版）. 北京：石油工業出版社，1227-1305.
3 郝守剛, 薛進莊. 2009. 早期陸生植物部分. 見：古生物學名詞審定委員會 編, 古生物學名詞（第二版）. 北京: 科學出版社.
學術論文Peer-reviewed papers
2017
1. Borja Cascales-Miñana*, Xue Jinzhuang*, Gonzalo Rial, Philippe Gerrienne, Huang Pu, Philippe Steemans. 2017. Revisiting the spore assemblages from the Lower Devonian Posongchong Formation of Wenshan, Yunnan Province, southwestern China. Earth and Environmental Science Transactions of the Royal Society of Edinburgh. Minor revision.
2. Huang Pu, Liu Lu, Qin Min, Liu Le, Deng Zhenzhen, Wang Deming, James F. Basinger, Jinzhuang Xue*. 2017. New Sphenophyllum plant from the Upper Devonian of Zhejiang Province, China. Historical Biology. DOI: 10.1080/08912963.2017.1322077
3. Huang Pu, Liu Le, Deng Zhenzhen, James F. Basinger, Xue Jinzhuang*. 2017. Xihuphyllum, a novel sphenopsid plant with large laminate leaves from the Upper Devonian of South China. Palaeogeography, Palaeoclimatology, Palaeoecology, 466: 7-20. http://dx.doi.org/10.1016/j.palaeo.2016.11.004
4. Liu Le, Wang Deming, Meng Meicen, Xue Jinzhuang. 2017. Further study of Late Devonian seed plant Cosmosperma polyloba and its evolutionary significance. BMC Evolutionary Biology. 17: 149. DOI 10.1186/s12862-017-0992-1
5. Zhou Changfu, Gao Keqin, Yi Hongyu, Xue Jinzhuang, Li Quanguo, Richard C. Fox. 2017. Earliest filter-feeding pterosaur from the Jurassic of China and ecological evolution of Pterodactyloidea. Royal Society Open Science, 4: 160672. http://dx.doi.org/10.1098/rsos.160672
2016
6. Xue Jinzhuang, Deng Zhenzhen, Huang Pu, Huang Kangjun, Michael J. Benton, Cui Ying, Wang Deming, Liu Jianbo, Shen Bing, James F. Basinger, Hao Shougang. 2016. Belowground rhizomes in paleosols: the hidden half of an Early Devonian vascular plant. Proceedings of the National Academy of Sciences of the United States of America, 113: 9451-9456.
7. Xue Jinzhuang, James F. Basinger. 2016. Melvillipteris quadriseriata gen. et sp. nov., a new plant from the Upper Devonian (Famennian) of Arctic Canada. Geological Magazine, 153: 601-617.
8. Xue Jinzhuang, Huang Pu, Wang Deming, William Oki Wong, Hao Shougang. 2016. Anatomy of the Middle Devonian cladoxylopsid Panxia gabata Wang et Berry from Yunnan, China. Review of Palaeobotany and Palynology, 224: 66-82. [see Review of Palaeobotany and Palynology, 2016, 228: 113-113, for Corrigendum to “Anatomy of the Middle Devonian cladoxylopsid Panxia gabata Y. Wang et Berry from Yunnan Province, southwestern China.]
9. Zhang Yingying, Xue Jinzhuang, Liu Le, Wang Deming. 2016. Periodicity of reproductive growth in lycopsids: An example from the Upper Devonian of Zhejiang Province, China. Palaeoworld, 25: 12-20.
10. Borja Cascales-Miñana, Philippe Gerrienne, Rafael Moreno-Domínguez, Jinzhuang Xue, José I. Valenzuela-Ríos, José B. Diez, Gonzalo Rial, Philippe Steemans. 2016. A new highly diverse palynoflora from the Lower Devonian Nogueras Formation of the Iberian Peninsula. Historical Biology, 28(8): 1118-1124. http://dx.doi.org/10.1080/08912963.2015.1111885
11. Zong Pu, Ma Xueping, Xue Jinzhuang, Jin Xiaochi. 2016. Comparative study of Late Devonian (Famennian) brachiopod assemblages, sea level changes, and geo-events in northwestern and southern China. Palaeogeography, Palaeoclimatology, Palaeoecology, 448: 298-316.
12. 鄧珍珍, 黃璞, 劉樂, 王德明, 薛進莊. 2016. 華南晚泥盆世假弱楔葉（Sphenophyllum pseudotenerrimum Sze）的新認識. 古生物學報, 55(1): 45-55. [Deng Zhenzhen, Huang Pu, Liu Le, Wang Deming, Xue Jinzhuang. 2016. New observations of Sphenophyllum pseudotenerrimum Sze (Sphenopsida) from the Late Devonian of South China. Acta Palaeontologica Sinica, 55(1): 45-55.]
13. 秦敏, 王德明, 薛進莊, 劉樂, 黃璞. 2016. 浙江長興晚泥盆世幾種羽狀複葉植物的發現及其意義. 古生物學報, 55(4): 424-432. [Qin Min, Wang Deming, Xue Jinzhuang, Liu Le, Huang Pu. 2016. Several fossils with pinnate compound leaves from the Upper Devonian of Changxing, Zhejiang Province, and the significances. Acta Palaeontologica Sinica, 55(4): 424-432.]
2015
14. Xue Jinzhuang, Huang Pu, Marcello Ruta, Michael J. Benton, Hao Shougang, Xiong Conghui, Wang Deming, Borja Cascales-Miñana, Wang Qi, Liu Le. 2015. Stepwise evolution of Paleozoic tracheophytes from South China: contrasting leaf disparity and taxic diversity. Earth-Science Reviews, 148: 77-93.
15. Xue Jinzhuang, Wang Qi, Wang Deming, Wang Yi, Hao Shougang. 2015. New observations of the early land plant Eocooksonia Doweld from the Pridoli (Upper Silurian) of Xinjiang, China. Journal of Asian Earth Sciences, 101: 30-38. [厘定拟萊尼蕨類、早期陸地植物的代表分子Eocooksonia的特征]
16. Xu Honghe, Xue Jinzhuang, Wang Qi. 2015. Notes on a fertile rhyniophytoid from the Lower Devonian of Guangxi, southwestern China. Historical Biology, 27: 294-298.
17. Liu Le, Wang Deming, Xue Jinzhuang, Meng Meicen. 2015. An anatomically preserved lycopsid from the Upper Devonian of South China. Historical Biology, 27: 308-315.
18. Wang Deming, Liu Le, Guo Yun, Xue Jinzhuang, Meng Meicen. 2015. A Late Devonian fertile organ with seed plant affinities from China. Scientific Reports, 5:10736. DOI: 10.1038/srep10736
19. Wang Deming, James F. Basinger, Huang Pu, Xue Jinzhuang, Liu Le, Meng Meicen, Zhang Yingying, Deng Zhenzhen. 2015. Latisemenia longshania, gen. et sp. nov., a new Late Devonian seed plant from China. Proceedings of the Royal Society B: Biological Sciences, 282: 20151613. http://dx.doi.org/10.1098/rspb.2015.1613
20. Borja Cascales-Miñana, Gonzalo Rial, Xue Jinzhuang, Luis Miguel Sender, Rafa Moreno-Domínguez, José B. Diez. 2015. New palaeobotanical data from the Lower Devonian of Mezquita de Loscos (Teruel Province, Spain). Historical Biology, 27: 299-307.
21. Wang Deming, Xu Honghe, Xue Jinzhuang, Wang Qi, Liu Le. 2015. Leaf evolution in early-diverging ferns: insights from a new fern-like plant from the Late Devonian of China. Annals of Botany, 115: 1133-1148.
22. 宗普, 薛進莊. 2015. 地質曆史時期大氣氧含量與生物多樣性的協同演變. 生物學通報, 50(4): 1-5. [Zong Pu, Xue Jinzhuang. 2015. Coevolution between atmospheric oxygen level and biodiversity in geological time. Bulletin of Biology (in Chinese).]
2014
23. Wang Deming, Liu Le, Meng Meicen, Xue Jinzhuang, Liu Tuo, Guo Yun. 2014. Cosmosperma polyloba gen. et sp. nov., a seed plant from the Upper Devonian of South China. Naturwissenschaften, 101: 615-622.
24. Wang Deming, Meng Meicen, Xue Jinzhuang, James F. Basinger, Guo Yun, Liu Le. 2014. Changxingia longifolia gen. et sp. nov., a new lycopsid from the Late Devonian of Zhejiang Province, South China. Review of Palaeobotany and Palynology, 203: 35-47.
25. 薛進莊, 黃璞, 王祺. 2014. Monilophytes（廣義真蕨類）的概念溯源及中文定名. 植物學研究, 3: 23-26. [Xue Jinzhuang, Huang Pu, Wang Qi, 2014. Notes on the history of the term Monilophytes and its Chinese name. Botanical Research, 3, 23-26 (in Chinese with English abstract).]
26. 薛進莊, 郝守剛. 2014. 志留紀—早泥盆世維管植物的譜系關系、幕式演化和地理分布：植物大化石證據. 古地理學報, 16(6): 861-877. [Xue Jinzhuang, Hao Shougang, 2014. Phylogeny, episodic evolution and geographic distribution of Silurian-Early Devonian vascular plants: evidence from plant megafossils. Journal of Palaeogeography, 16(6): 861-877 (in Chinese with English abstract).]
27. 宗普, 薛進莊, 唐賓. 2014. 追溯最古老的琥珀——樹脂植物的起源與演化. 岩石礦物學雜志, 33 (增2): 111-116. [Zong Pu, Xue Jinzhuang, Tang Bin. 2014. Tracing the most ancient amber: the origin and evolution of resin-producing plants. Acta Petrologica Et Mineralogica, 33 (supp. 2): 111-116 (in Chinese with English abstract).]
28. 宗普, 薛進莊. 2014. 地史時期生物大滅絕及其對當代生物多樣性的啟示. 生物學通報, 49 (10): 1-6. [Zong Pu, Xue Jinzhuang. 2014. Mass extinctions in geological times and implications for modern biodiversity. Bulletin of Biology, 49(10): 1-6 (in Chinese).]
2013
29. Xue Jinzhuang. 2013. New material of Hueberia zhichangensis Yang, Li & Edwards, a basal lycopsid from the Early Devonian of Yunnan, China. Neues Jahrbuch für Geologie und Paläontologie, Abhandlungen, 267: 331-339.
30. Liu Le, Wang Deming, Xue Jinzhuang, Meng Meicen, Guo Yun. 2013. Reinvestigation of the lycopsid Minarodendron cathaysiense from the Middle Devonian of South China. Neues Jahrbuch für Geologie und Paläontologie, Abhandlungen, 268: 325-339.
31. Hao Shougang, Xue Jinzhuang. 2013b. Earliest record of megaphylls and leafy structures, and their initial diversification. Chinese Science Bulletin, 58: 2784-2793.
32. Lamsdell JC, Xue Jinzhuang, Selden PA. 2013. A new horseshoe crab (Arthropoda: Chelicerata: Xiphosura) from the Lower Devonian (Lochkovian) of Yunnan, China. Geological Magazine, 150: 367-370.
33. Meng Meicen, Wang Deming, Xue Jinzhuang, Zhu Xiao. 2013. New insights and evolutionary significance of the megasporangiate strobilus of Minostrobus chaohuensis (Lycopsida) from the Upper Devonian of South China. Review of Palaeobotany and Palynology, 190: 20-40.
34. Xiong Conghui, Wang Deming, Wang Qi, Michael J. Benton, Xue Jinzhuang, Meng Meicen, Zhao Qi, Zhang Jing. 2013. Diversity Dynamics of Silurian–Early Carboniferous Land Plants in South China. PLoS ONE, 8(9): e75706.
35. 馬學平, 宗普, 張宇波, 張美瓊, 薛進莊. 2013. 新疆準噶爾盆地西北緣晚泥盆世法門期地層之劃分. 地學前緣, 20 (6): 255-268. [Ma Xueping, Zong Pu, Zhang Yubo, Zhang Meiqiong, Xue Jinzhuang. 2013. Subdivision of Famennian (Late Devonian) strata in the Northwest border of the Junggar Basin, Xinjiang, northwestern China. Earth Science Frontiers, 20 (6): 255-268 (in Chinese with English abstract).]
2012
36. Xue Jinzhuang, Hao Shougang, Zhu Xiao, Wang Deming. 2012. A new basal euphyllophyte, Pauthecophyton gen. nov., from the Lower Devonian (Pragian) of Yunnan, China. Review of Palaeobotany and Palynology, 183: 9-20. [研究了華南的一類原始的真葉植物Pauthecophyton]
37. Xue Jinzhuang. 2012. Lochkovian plants from the Xitun Formation of Yunnan, China, and their paleophytogeographical significance. Geological Magazine, 149: 333-344. [報道華南最早的複雜植物群]
38. Hao Shougang, Xue Jinzhuang, Zhu Xiao, Wang Deming. 2012. A new genus of Early Devonian plants with novel strobilar structures and vegetative appendages from the Posongchong Formation of Yunnan, China. Review of Palaeobotany and Palynology, 171: 73-82.
39. Wang Qi, Xue Jinzhuang. 2012. On the type of Pseudosporochnus (Fossil Cladoxylopsida). Novon: A Journal for Botanical Nomenclature, 22: 240-243.
2011
40. Xue Jinzhuang. 2011. Phylogeny of Devonian lycopsids inferred from Bayesian phylogenetic analyses. Acta Geologica Sinica (English Edition), 85: 569-580.
41. Hao Shougang, Xue Jinzhuang. 2011. A new zosterophyll plant, Ramoferis gen. nov., from the Posongchong Formation of Lower Devonian (Pragian) of Southeastern Yunnan, China. Acta Geologica Sinica (English Edition), 85: 765-776.
42. Zhu Xiao, Xue Jinzhuang, Hao Shougang, Wang Deming. 2011. A new species of Adoketophyton from the Lower Devonian (Pragian) Posongchong Formation of Yunnan, China. Review of Palaeobotany and Palynology, 164: 238-246.
43. Xue Jinzhuang, Wang Qi. 2011. Fusiformitheca, a new name for Fusitheca Wellman, Edwards et Axe, 1998, non Bonorden, 1864. Palaeoworld, 20: 98.
2010
44. Xue Jinzhuang, Hao Shougang, James F. Basinger. 2010. Anatomy of the Late Devonian Denglongia hubeiensis, with a discussion of the phylogeny of the Cladoxylopsida. International Journal of Plant Sciences, 171: 107-120. [将貝葉斯系統學方法引入古生代古植物學研究，分析原始真蕨類基部類群的系統關系，提出存在一個以伊瑞蕨類為基幹的類群]
45. Hao Shougang, Xue Jinzhuang, Guo Dali, Wang Deming. 2010. Earliest rooting system and root/shoot ratio from a new Zosterophyllum plant. New Phytologist, 185: 217-225. 國家自然科學基金委情況交流、《中國科學基金》、《科學通報》報道；另見科普文章：郝守剛, 2010. 一株4億年前的完整植物——鬧市區的重要發現. 化石, 3: 51-54.
46. 薛進莊, 張華僑. 2010. 古生物學術語冠群和幹群的釋義問題. 中國科技術語, 12 (4): 57-58, 62. [Xue Jinzhuang, Zhang Huaqiao. 2010. Notes on the definition of two paleontological terms - crown group and stem group. China Terminology, 12: 57-58, 62. (in Chinese with English abstract).]
47. 薛進莊. 2010. 鄂西晚泥盆世似種子結構武漢仙籽（Sphinxiocarpon wuhanium）的形态學研究. 古生物學報, 49: 344-354. [Xue Jinzhuang. 2010. Morphological observations of the seed-like structure Sphinxiocarpon wuhanium from the Upper Devonian of Hubei, China. Acta Palaeontologica Sinica, 49: 344-354. (in Chinese with English abstract).]
48. 薛進莊, 郝守剛. 2010. 東胡林4号人牙齒形态特征觀察. 人類學學報, 29 (3): 253-263. [Xue Jinzhuang, Hao Shougang. 2010. Morphological features of the teeth of “Donghulin Man 4”. Acta Anthropologica Sinica, 29 (3): 253-263. (in Chinese with English abstract).]
2009
49. Xue Jinzhuang. 2009. Two zosterophyll plants from the Lower Devonian (Lochkovian) Xitun Formation of northeastern Yunnan, China. Acta Geologica Sinica (English Edition), 83 (3): 504-512.
2008
50. Xue Jinzhuang, Hao Shougang. 2008. Denglongia hubeiensis gen. et sp. nov., a new plant attributed to Cladoxylopsida from the Upper Devonian (Frasnian) of South China. International Journal of Plant Sciences, 169 (9): 1314-1331.
51. 薛進莊, 郝守剛. 2008. 泥盆紀枝蕨綱的分支系統學研究. beat365學報（自然科學版）, 44(2): 299-307. [Xue Jinzhuang, Hao Shougang. 2008. A Cladistic Study on Devonian Cladoxylopsida. Acta Scientiarum Naturalium Universitatis Pekinensis, 44(2): 299-307 (in Chinese with English abstract).]
52. 郝守剛, 薛進莊, 崔海亭. 2008. 東胡林四号人墓葬中的果核. 人類學學報, 27(3): 249-255. [Hao Shougang, Xue Jinzhuang, Cui Haiting. 2008. Seeds of Celtis L. Accompanied with Occurrence of“Donghulin Man 4”. Acta Anthropologica Sinica, 27(3): 249-255 (in Chinese with English abstract).]
2007
53. Xue Jinzhuang, Hao Shougang. 2007. A lycopsid plant from the Upper Devonian of Hubei Province, China. Acta Palaeontologica Sinica, 46 (2): 183-194.
54. Hao Shougang, Xue Jinzhuang, Wang Qi, Liu Zhenfeng. 2007. Yuguangia ordinata gen. et sp. nov., a new lycopsid from the Middle Devonian (late Givetian) of Yunnan, China and its phylogenetic implications. International Journal of Plant Sciences, 168(8): 1161-1175.
55. Hao Shougang, Xue Jinzhuang, Liu Zhenfeng, Wang Deming. 2007. Zosterophyllum Penhallow around the Silurian-Devonian boundary of northeastern China and its phytogeographic implications. International Journal of Plant Sciences, 168 (4): 477-489.
56. Wang Qi, Xue Jinzhuang, Prestianni C. 2007. Sphinxiocarpon, a new name for Sphinxia Li, Hilton & Hemsley (fossil Tracheophyta). Lethaia, 40: 393. [Wang Qi, Xue Jinzhuang, Prestianni C, 2008. Erratum to the article: Sphinxiocarpon, a new name for Sphinxia Li, Hilton & Hemsley, 1997-not Reid & Chandler, 1933. Lethaia 41 (3): 301.]
2006
57. Hao Shougang, Wang Deming, Wang Qi, Xue Jinzhuang. 2006. A new lycopsid, Zhenglia radiata gen. et sp. nov., from the Lower Devonian Posongchong Formation of Southeastern Yunnan, China. Acta Geologica Sinica (English Edition), 80: 11-19.
58. Wang Deming, Hao Shougang, Tian Lin, Xue Jinzhuang. 2006. Further study of the Late Devonian sphenopsid Hamatophyton verticillatum from China. International Journal of Plant Sciences, 167: 885-896.
59. Wang Deming, Hao Shougang, Wang Qi, Xue Jinzhuang. 2006. Anatomy of the Late Devonian sphenopsid Rotafolia songziensis, with a discussion of stellar architecture of the sphenophyllales. International Journal of Plant Sciences, 167: 373-383.
60. 薛進莊, 郝守剛, 王德明. 2006. 中－晚泥盆世石松植物研究綜述. beat365學報（自然科學版）, 42 (6): 808-816. [Xue Jinzhuang, Hao Shougang, Wang Deming. 2006. A Review of the Middle-Late Devonian Lycopsids. Acta Scientiarum Naturalium Universitatis Pekinensis, 42 (6): 808-816 (in Chinese with English abstract).]
2005
61. Xue Jinzhuang, Hao Shougang, Wang Deming, Liu Zhenfeng. 2005. A new lycopsid from the Upper Devonian of China. International Journal of Plant Sciences, 166: 519-531.
科普論文Popular science papers
1 薛進莊. 2017. 植物如何征服陸地? 大自然. 2: 40-43.
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